PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR11G03390.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 467aa    MW: 51490 Da    PI: 6.6838
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR11G03390.3genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.4e-10160218563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+   + l++e+
  LPERR11G03390.3 160 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSTQLTLLQRDTSGLTAEN 218
                      9*********************************************9999888888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-15156220IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.036158221IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.2E-10160211No hitNo description
PfamPF001704.6E-9160217IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.3E-11160214No hitNo description
CDDcd147034.98E-17161197No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MDPRFPPPSA RGHHRRAHSE TFIRLPDADL LLDPDGDFGF SDLDFPSLSD DSPAASDPTP  60
PPLPPLQQQQ SSSSAAPPPP RPVPGGGGGG GGHLRSLSLD AAFFDGLSFQ GGGGGGIGHK  120
RSGSMDGESS LFEGESAPPD YAKKAMPADR LAELSLLDPK RAKRILANRQ SAARSKERKI  180
KYTSELERKV QTLQTEATTL STQLTLLQRD TSGLTAENRE LKLRLQSMEE QAKLRDALND  240
ALREEVQRLK IAAGQVPNMN GSSFNGVQQQ QQMPSYFSQP QQMHYLSGHQ GRQHHPNNPH  300
NSFNGGQSMS GQTLNDSMDF IRLEHILLRM HSVVEEAEGC HITNPGMLLL QGFIEGFYLG  360
YYMLDEIKFQ PPEEESIKDE GDTSRAQTSR RISAAKDSGR SSTQHEWKLL QRRSTAAADA  420
VYFSQPQQMH YLSDHQGRHH HPNNPHNSFN GGQSMNGQAL NDSMDFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8285020.0CT828502.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA011L18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015617778.11e-155PREDICTED: transcription factor VIP1
SwissprotQ9MA752e-71VIP1_ARATH; Transcription factor VIP1
TrEMBLA0A0D9XPC50.0A0A0D9XPC5_9ORYZ; Uncharacterized protein
STRINGORGLA11G0036500.11e-155(Oryza glaberrima)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.14e-45VIRE2-interacting protein 1